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Anti-sp100 seropositivity in primary biliary cholangitis

near HLA-DQB1 · rs1794280

What each result means

A/A Published research associates this genotype with typical/baseline likelihood of Anti-sp100 seropositivity in primary biliary cholangitis — no copies of the reported risk allele. (GWAS Catalog, Hepatology 2019, PMID:30854688)
A/T Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Anti-sp100 seropositivity in primary biliary cholangitis. (GWAS Catalog, Hepatology 2019, PMID:30854688)
T/T Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Anti-sp100 seropositivity in primary biliary cholangitis compared to the general population. (GWAS Catalog, Hepatology 2019, PMID:30854688)

Source: GWAS Catalog, Hepatology 2019, PMID:30854688

Questions about rs1794280

What is rs1794280?

rs1794280 is a single position in the genome, in or near the near HLA-DQB1 gene. Published research associates it with anti-sp100 seropositivity in primary biliary cholangitis. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs1794280 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs1794280 come from?

GWAS Catalog, Hepatology 2019, PMID:30854688. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

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