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IgA nephropathy

HLA-DQA/B · rs1794275

Where this position leads

Condition: IgA Nephropathy

rs1794275 Condition: IgA Nephropathy IgA Nephropathy Condition rs1794275 rs1794275 HLA-DQA/B

What the study found

Who was studied 1,434 Han Chinese ancestry cases, 4,270 Han Chinese ancestry controls; replicated in 2,703 Han Chinese ancestry cases, 3,464 Han Chinese ancestry controls.

The effect Each copy of the A allele carried 1.30 times the odds of IgA nephropathy (95% confidence interval 1.21-1.39); p = 3 × 10−13.

How common The A allele had a frequency of about 15% in the people studied.

Where it sits Chromosome 6, band 6p21.32 — between genes, 2.7 kb from MTCO3P1.

What each result means

A/A Two copies of the version the research linked to IgA nephropathy. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to IgA nephropathy. That is a smaller link than two copies.
G/G No copy of the version the research linked to IgA nephropathy. This is the starting point the study compared everyone against.
Source

Questions about rs1794275

What is rs1794275?

rs1794275 is a single position in the genome, in or near the HLA-DQA/B gene. Published research associates it with iga nephropathy. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs1794275 linked to?

On MyGeneLog this position is linked to IgA Nephropathy. The research behind each link, and its sources, are set out on that condition page.

Does having rs1794275 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs1794275 come from?

GWAS Catalog, Nat Genet 2011, PMID:22197929. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

IgA nephropathy (rs1794275). MyGeneLog™. https://www.mygenelog.com/variants/rs1794275

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