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Its strongest genetic-study result is p = 10−21, with 6 associations in the GWAS Catalog.
How this is scored
4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.
What the study found
Who was studied 564,698 European ancestry individuals.
The effect
Each copy of the C allele shifted the measure 0.0142 higher (95% confidence interval 0.0093-0.0191); p = 9 × 10−9.
How common The C allele had a frequency of about 81% in the people studied.
Where it sits Chromosome 8, band 8q23.3 — in an intron of TRPS1.
How common each version is
CT
KoreanKRGDB
C 98.5% · T 1.5%
KoreanKorea4K
C 98.8% · T 1.2%
KoreanKorea1K
C 98.7% · T 1.3%
Japanese ToMMo
C 98.1% · T 1.9%
Vietnamese
C 97.7% · T 2.3%
World gnomAD
C 86.0% · T 14.0%
World 1000 Genomes
C 91.4% · T 8.6%
World TOPMed
C 86.4% · T 13.6%
The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.
What each result means
C/CTwo copies of the version the research linked to Self-reported math ability. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/TOne copy of the version the research linked to Self-reported math ability. That is a smaller link than two copies.
T/TNo copy of the version the research linked to Self-reported math ability. This is the starting point the study compared everyone against.
rs17716502 is a single position in the genome, in or near the TRPS1 gene. Published research associates it with self-reported math ability. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.
What conditions is rs17716502 linked to?
On MyGeneLog this position is linked to Educational Attainment. The research behind each link, and its sources, are set out on that condition page.
Does having rs17716502 mean I will get this?
No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.
Where does the information about rs17716502 come from?
GWAS Catalog, Nat Genet 2018, PMID:30038396. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.
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Quoting this page
Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.
Self-reported math ability (rs17716502). MyGeneLog™. https://www.mygenelog.com/variants/rs17716502