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PRTN3 protein levels

PALM · rs17684039

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0801 lower (95% confidence interval 0.062-0.098); p = 3 × 10−20.

How common The A allele had a frequency of about 11% in the people studied.

Where it sits Chromosome 19, band 19p13.3 — in an intron of PALM.

What each result means

A/A Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of PRTN3 protein levels compared to the general population.
A/G Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with PRTN3 protein levels.
G/G Published research associates this genotype with typical/baseline likelihood of PRTN3 protein levels — no copies of the reported risk allele.
Source

Questions about rs17684039

What is rs17684039?

rs17684039 is a single position in the genome, in or near the PALM gene. Published research associates it with prtn3 protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs17684039 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs17684039 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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PRTN3 protein levels (rs17684039). MyGeneLog™. https://www.mygenelog.com/variants/rs17684039

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