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Putamen iron levels (R2* MRI)

CARMIL1 · rs17492120

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−50, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 39,533 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.144 higher (95% confidence interval 0.12-0.16); p = 9 × 10−51.

Where it sits Chromosome 6, band 6p22.2 — in an intron of CARMIL1.

What each result means

C/C Two copies of the version the research linked to Putamen iron levels (R2* MRI). That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Putamen iron levels (R2* MRI). That is a smaller link than two copies.
T/T No copy of the version the research linked to Putamen iron levels (R2* MRI). This is the starting point the study compared everyone against.
Source

Questions about rs17492120

What is rs17492120?

rs17492120 is a single position in the genome, in or near the CARMIL1 gene. Published research associates it with putamen iron levels (r2* mri). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs17492120 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs17492120 come from?

GWAS Catalog, Neurobiology of disease 2024, PMID:38789058. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Putamen iron levels (R2* MRI) (rs17492120). MyGeneLog™. https://www.mygenelog.com/variants/rs17492120

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