Standard

Triglyceride levels

near LPL · rs17489373

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−503, with 19 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 342,233 European ancestry individuals, 6,014 African ancestry individuals, 7,330 South Asian ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.129 lower (95% confidence interval 0.12-0.13); p = 3 × 10−503.

Where it sits Chromosome 8, band 8p21.3 — between genes, 30.6 kb from LPL.

How common each version is

AG
Korean KRGDB
A 20.3% · G 79.7%
Korean Korea4K
A 19.9% · G 80.1%
Korean Korea1K
A 20.0% · G 80.0%
Japanese ToMMo
A 19.4% · G 80.6%
Vietnamese
A 20.1% · G 79.9%
World gnomAD
A 25.7% · G 74.4%
World 1000 Genomes
A 24.8% · G 75.2%
World TOPMed
A 25.4% · G 74.6%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Triglyceride levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Triglyceride levels. That is a smaller link than two copies.
G/G No copy of the version the research linked to Triglyceride levels. This is the starting point the study compared everyone against.
Source

Questions about rs17489373

What is rs17489373?

rs17489373 is a single position in the genome, in or near the near LPL gene. Published research associates it with triglyceride levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs17489373 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs17489373 come from?

GWAS Catalog, Nature genetics 2021, PMID:33462484. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Triglyceride levels (rs17489373). MyGeneLog™. https://www.mygenelog.com/variants/rs17489373

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