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Standard

Sphingomyelins (FA14:0) (Model 2)

SYNE2 · rs17225497

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−26, with 3 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 7,125 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.388 higher; p = 1 × 10−26.

Where it sits Chromosome 14, band 14q23.2 — inside SYNE2.

How common each version is

GT
Korean KRGDB
G 96.1% · T 3.9%
Korean Korea4K
G 96.5% · T 3.5%
Korean Korea1K
G 95.1% · T 4.9%
Japanese ToMMo
G 96.4% · T 3.6%
Vietnamese
G 94.4% · T 5.6%
World gnomAD
G 95.2% · T 4.9%
World 1000 Genomes
G 94.8% · T 5.2%
World TOPMed
G 95.2% · T 4.8%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

G/G No copy of the version the research linked to Sphingomyelins (FA14:0) (Model 2). This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Sphingomyelins (FA14:0) (Model 2). That is a smaller link than two copies.
T/T Two copies of the version the research linked to Sphingomyelins (FA14:0) (Model 2). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Sphingomyelins (FA14:0) (Model 2) (rs17225497). MyGeneLog™. https://www.mygenelog.com/variants/rs17225497

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