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Standard

Phospholipids to Total Lipids in Medium HDL percentage

near FGFR1 · rs17175624

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−12, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the T allele shifted the measure 0.01 % higher (95% confidence interval 0.01-0.01); p = 3 × 10−12.

Where it sits Chromosome 8, band 8p11.23 — between genes, 1 kb from FGFR1.

How common each version is

GT
Korean KRGDB
G 70.7% · T 29.3%
Korean Korea4K
G 71.0% · T 29.0%
Korean Korea1K
G 71.3% · T 28.7%
Japanese ToMMo
G 70.4% · T 29.6%
Vietnamese
G 60.4% · T 39.6%
World gnomAD
G 65.7% · T 34.3%
World 1000 Genomes
G 65.9% · T 34.1%
World TOPMed
G 67.5% · T 32.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

G/G No copy of the version the research linked to Phospholipids to Total Lipids in Medium HDL percentage. This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Phospholipids to Total Lipids in Medium HDL percentage. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Phospholipids to Total Lipids in Medium HDL percentage. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

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Phospholipids to Total Lipids in Medium HDL percentage (rs17175624). MyGeneLog™. https://www.mygenelog.com/variants/rs17175624

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