Sensitive

Basal cell carcinoma

near GACAT3 · rs16982253

Where this position leads

Condition: Basal Cell Carcinoma

rs16982253 Condition: Basal Cell Carcinoma Basal Cell Carcinoma Condition rs16982253 rs16982253 near GACAT3

What the study found

Who was studied 49,905 European ancestry cases, 752,392 European ancestry controls, 626 Hispanic or Latin American cases, 9,842 Hispanic or Latin American controls.

The effect The reported allele is C; the catalogue records no effect size ; p = 1 × 10−32.

Where it sits Chromosome 2, band 2p24.3 — between genes, 229.9 kb from GACAT3.

What each result means

C/C Two copies of the version the research linked to Basal cell carcinoma. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Basal cell carcinoma. That is a smaller link than two copies.
T/T No copy of the version the research linked to Basal cell carcinoma. This is the starting point the study compared everyone against.
Source

Questions about rs16982253

What is rs16982253?

rs16982253 is a single position in the genome, in or near the near GACAT3 gene. Published research associates it with basal cell carcinoma. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs16982253 linked to?

On MyGeneLog this position is linked to Basal Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs16982253 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs16982253 come from?

GWAS Catalog, Communications biology 2024, PMID:38182794. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Basal cell carcinoma (rs16982253). MyGeneLog™. https://www.mygenelog.com/variants/rs16982253

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