Standard

Height

ACAN · rs16942341

Where this position leads

Condition: Height

rs16942341 Condition: Height Height Condition rs16942341 rs16942341 ACAN

What the study found

Who was studied 133,653 European ancestry individuals; replicated in 50,074 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.13 lower; p = 4 × 10−27.

How common The T allele had a frequency of about 3% in the people studied.

Where it sits Chromosome 15, band 15q26.1 — a synonymous change in ACAN.

What ClinVar records

Classification Benign for Spondyloepimetaphyseal dysplasia, aggrecan type, Short stature and advanced bone age, with or without early-onset osteoarthritis and/or osteochondritis dissecans, Spondyloepiphyseal dysplasia, Kimberley type; criteria provided, multiple submitters, no conflicts (2 of 4 stars, 7 submitters), last evaluated 2026-05-09. ClinVar record 1206376 NM_001369268.1(ACAN):c.1221C>T (p.Val407=)

What this is ClinVar's aggregate record for this position (as of its 2026-10-19 release), not a result about you. A classification describes the variant against the condition named, as laboratories submitted it. Whether a person carries this variant, and what that would mean for them, is a question for a clinical test and a genetic counsellor.

What each result means

C/C No copy of the version the research linked to Height. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Height. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Height. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs16942341

What is rs16942341?

rs16942341 is a single position in the genome, in or near the ACAN gene. Published research associates it with height. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs16942341 linked to?

On MyGeneLog this position is linked to Height. The research behind each link, and its sources, are set out on that condition page.

Does having rs16942341 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs16942341 come from?

GWAS Catalog, Nature 2010, PMID:20881960. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Height (rs16942341). MyGeneLog™. https://www.mygenelog.com/variants/rs16942341

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