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BTN3A2 protein levels

NLRC5 · rs154045

Where this position leads

Condition: Celiac Disease

rs154045 Condition: Celiac Disease Celiac Disease Condition rs154045 rs154045 NLRC5

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.0163 higher (95% confidence interval 0.01-0.022); p = 3 × 10−17.

How common The G allele had a frequency of about 60% in the people studied.

Where it sits Chromosome 16, band 16q13 — in an intron of NLRC5.

What each result means

A/A No copy of the version the research linked to BTN3A2 protein levels. This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to BTN3A2 protein levels. That is a smaller link than two copies.
G/G Two copies of the version the research linked to BTN3A2 protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs154045

What is rs154045?

rs154045 is a single position in the genome, in or near the NLRC5 gene. Published research associates it with btn3a2 protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs154045 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs154045 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs154045 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

BTN3A2 protein levels (rs154045). MyGeneLog™. https://www.mygenelog.com/variants/rs154045

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