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Central nucleus volume

near SLC39A8 · rs151379

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−8, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 35,292 European ancestry individuals, 227 African ancestry individuals, 380 South Asian ancestry individuals, 115 East Asian ancestry individuals, 338 individuals.

The effect Each copy of the C allele shifted the measure 0.487 lower (95% confidence interval 0.32-0.65); p = 5 × 10−9.

Where it sits Chromosome 4, band 4q24 — between genes, 52.3 kb from SLC39A8.

What each result means

C/C Two copies of the version the research linked to Central nucleus volume. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Central nucleus volume. That is a smaller link than two copies.
T/T No copy of the version the research linked to Central nucleus volume. This is the starting point the study compared everyone against.
Source

Questions about rs151379

What is rs151379?

rs151379 is a single position in the genome, in or near the near SLC39A8 gene. Published research associates it with central nucleus volume. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs151379 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs151379 come from?

GWAS Catalog, Biological psychiatry 2024, PMID:37391117. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Central nucleus volume (rs151379). MyGeneLog™. https://www.mygenelog.com/variants/rs151379

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