Links from this page to related variants, conditions, drugs and topics are not included for automated readers. Those connections are the Gene Knowledge Graph and are licensed as data: https://www.mygenelog.com/license

Standard

Monocyte count

near GFI1 · rs150649461

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−586, with 12 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 639,696 African American or Afro-Caribbean, African ancestry, European ancestry, East Asian ancestry, Hispanic or Latin American and South Asian ancestry individuals.

The effect The reported allele is C; the catalogue records no effect size ; p = 5 × 10−587.

How common The C allele had a frequency of about 1% in the people studied.

Where it sits Chromosome 1, band 1p22.1 — between genes, 12.3 kb from GFI1.

How common each version is

CG

By ancestry gnomAD

European (non-Finnish)
C 1.6% · G 98.4%
African / African American
G 99.8%
South Asian
G 100.0%
Admixed American (Latino)
C 1.2% · G 98.8%
Finnish
C 3.8% · G 96.2%
Ashkenazi Jewish
G 99.8%

The share of all copies of this position that are each version. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

C/C Two copies of the version the research linked to Monocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/G One copy of the version the research linked to Monocyte count. That is a smaller link than two copies.
G/G No copy of the version the research linked to Monocyte count. This is the starting point the study compared everyone against.
DNA databases also record a third, rare version at this position, carried on fewer than one in a hundred copies of the DNA. The three results above cover the two common versions only.
Source

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Monocyte count (rs150649461). MyGeneLog™. https://www.mygenelog.com/variants/rs150649461

← See all variants