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Vitamin D deficiency

near ATP2B1 · rs150425221

Where this position leads

Condition: Vitamin D Deficiency and the GC Gene

rs150425221 Condition: Vitamin D Deficiency and the GC Gene Vitamin D Deficiency and the GC Gene Condition rs150425221 rs150425221 near ATP2B1

What the study found

Who was studied 3,598 Qatari ancestry cases, 2,287 Qatari ancestry controls; replicated in 4,641 Qatari ancestry cases, 3,126 Qatari ancestry controls.

The effect The reported allele is C; the catalogue records no effect size ; p = 6 × 10−12.

How common The C allele had a frequency of about 1% in the people studied.

Where it sits Chromosome 12, band 12q21.33 — in an intron of ATP2B1-AS1.

What each result means

C/C Two copies of the version the research linked to Vitamin D deficiency. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Vitamin D deficiency. That is a smaller link than two copies.
T/T No copy of the version the research linked to Vitamin D deficiency. This is the starting point the study compared everyone against.
Source

Questions about rs150425221

What is rs150425221?

rs150425221 is a single position in the genome, in or near the near ATP2B1 gene. Published research associates it with vitamin d deficiency. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs150425221 linked to?

On MyGeneLog this position is linked to Vitamin D Deficiency and the GC Gene. The research behind each link, and its sources, are set out on that condition page.

Does having rs150425221 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs150425221 come from?

GWAS Catalog, International journal of molecular sciences 2025, PMID:41096749. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Vitamin D deficiency (rs150425221). MyGeneLog™. https://www.mygenelog.com/variants/rs150425221

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