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Standard

High density lipoprotein cholesterol levels

near MPP3 · rs149580368

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−43, with 12 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.159 higher (95% confidence interval -); p = 1 × 10−43.

Where it sits Chromosome 17, band 17q21.31 — between genes, 3.4 kb from MPP3.

What each result means

A/A No copy of the version the research linked to High density lipoprotein cholesterol levels. This is the starting point the study compared everyone against.
A/C One copy of the version the research linked to High density lipoprotein cholesterol levels. That is a smaller link than two copies.
C/C Two copies of the version the research linked to High density lipoprotein cholesterol levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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High density lipoprotein cholesterol levels (rs149580368). MyGeneLog™. https://www.mygenelog.com/variants/rs149580368

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