Standard

Principal component-derived dietary pattern 26

GLIS3 · rs149505107

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−9, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 449,210 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.0737 higher (95% confidence interval 0.05-0.098); p = 1 × 10−9.

How common The G allele had a frequency of about 99% in the people studied.

Where it sits Chromosome 9, band 9p24.2 — in an intron of GLIS3.

What each result means

C/C No copy of the version the research linked to Principal component-derived dietary pattern 26. This is the starting point the study compared everyone against.
C/G One copy of the version the research linked to Principal component-derived dietary pattern 26. That is a smaller link than two copies.
G/G Two copies of the version the research linked to Principal component-derived dietary pattern 26. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs149505107

What is rs149505107?

rs149505107 is a single position in the genome, in or near the GLIS3 gene. Published research associates it with principal component-derived dietary pattern 26. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs149505107 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs149505107 come from?

GWAS Catalog, Nature communications 2020, PMID:32193382. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Principal component-derived dietary pattern 26 (rs149505107). MyGeneLog™. https://www.mygenelog.com/variants/rs149505107

← See all variants