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Alkaline phosphatase (UKB data field 30610)

near CLEC10A · rs142467156

Where this position leads

Condition: Celiac Disease

rs142467156 Condition: Celiac Disease Celiac Disease Condition rs142467156 rs142467156 near CLEC10A

What the study found

Who was studied 394,642 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0321 lower (95% confidence interval 0.023-0.042); p = 9 × 10−12.

How common The C allele had a frequency of about 4% in the people studied.

Where it sits Chromosome 17, band 17p13.1 — between genes, 14.9 kb from CLEC10A.

What each result means

C/C Two copies of the version the research linked to Alkaline phosphatase (UKB data field 30610). That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Alkaline phosphatase (UKB data field 30610). That is a smaller link than two copies.
T/T No copy of the version the research linked to Alkaline phosphatase (UKB data field 30610). This is the starting point the study compared everyone against.
Source

Questions about rs142467156

What is rs142467156?

rs142467156 is a single position in the genome, in or near the near CLEC10A gene. Published research associates it with alkaline phosphatase (ukb data field 30610). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs142467156 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs142467156 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs142467156 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Alkaline phosphatase (UKB data field 30610) (rs142467156). MyGeneLog™. https://www.mygenelog.com/variants/rs142467156

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