Standard

Pork consumption

CSGALNACT1 · rs13252421

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−7, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 446,607 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.051 higher (95% confidence interval 0.033-0.069); p = 4 × 10−8.

How common The C allele had a frequency of about 99% in the people studied.

Where it sits Chromosome 8, band 8p21.3 — in an intron of CSGALNACT1.

What each result means

C/C Two copies of the version the research linked to Pork consumption. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/G One copy of the version the research linked to Pork consumption. That is a smaller link than two copies.
G/G No copy of the version the research linked to Pork consumption. This is the starting point the study compared everyone against.
Source

Questions about rs13252421

What is rs13252421?

rs13252421 is a single position in the genome, in or near the CSGALNACT1 gene. Published research associates it with pork consumption. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs13252421 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs13252421 come from?

GWAS Catalog, Nature communications 2020, PMID:32193382. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Pork consumption (rs13252421). MyGeneLog™. https://www.mygenelog.com/variants/rs13252421

← See all variants