Sensitive

Breast cancer (estrogen-receptor positive)

near TNP1 · rs12998806

Where this position leads

Condition: Breast Cancer

rs12998806 Condition: Breast Cancer Breast Cancer Condition rs12998806 rs12998806 near TNP1

What the study found

Who was studied 1795 African American cases, 99 African ancestry cases, 4,150 African American controls, 624 African ancestry controls; replicated in 1093 African American cases, 2939 African American controls.

The effect Each copy of the G allele carried 1.34 times the odds of Breast cancer (estrogen-receptor positive) (95% confidence interval 1.21-1.48); p = 2 × 10−8.

How common The G allele had a frequency of about 86% in the people studied.

Where it sits Chromosome 2, band 2q35 — in an intron of TESHL.

What each result means

A/A No copy of the version the research linked to Breast cancer (estrogen-receptor positive). This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Breast cancer (estrogen-receptor positive). That is a smaller link than two copies.
G/G Two copies of the version the research linked to Breast cancer (estrogen-receptor positive). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs12998806

What is rs12998806?

rs12998806 is a single position in the genome, in or near the near TNP1 gene. Published research associates it with breast cancer (estrogen-receptor positive). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12998806 linked to?

On MyGeneLog this position is linked to Breast Cancer. The research behind each link, and its sources, are set out on that condition page.

Does having rs12998806 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12998806 come from?

GWAS Catalog, Hum Mol Genet 2016, PMID:28171663. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Breast cancer (estrogen-receptor positive) (rs12998806). MyGeneLog™. https://www.mygenelog.com/variants/rs12998806

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