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Varicose veins

NFATC2 · rs12625547

Where this position leads

Conditions: Colon Polyp, Varicose Veins

rs12625547 Condition: Colon Polyp Colon Polyp Condition Condition: Varicose Veins Varicose Veins Condition rs12625547 rs12625547 NFATC2

What the study found

Who was studied 22,037 European ancestry cases, 437,665 European ancestry controls, 474 East Asian ancestry cases, 178,252 East Asian ancestry controls.

The effect Each copy of the G allele shifted the measure 0.14 lower (95% confidence interval 0.11-0.17); p = 2 × 10−23.

Where it sits Chromosome 20, band 20q13.2 — in an intron of NFATC2.

What each result means

G/G Two copies of the version the research linked to Varicose veins. That is the strongest link of the three results. A link in a study is not a diagnosis.
G/T One copy of the version the research linked to Varicose veins. That is a smaller link than two copies.
T/T No copy of the version the research linked to Varicose veins. This is the starting point the study compared everyone against.
Source

Questions about rs12625547

What is rs12625547?

rs12625547 is a single position in the genome, in or near the NFATC2 gene. Published research associates it with varicose veins. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12625547 linked to?

On MyGeneLog this position is linked to Colon Polyp, Varicose Veins. The research behind each link, and its sources, are set out on that condition page.

Does having rs12625547 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12625547 come from?

GWAS Catalog, Nature genetics 2021, PMID:34594039. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Varicose veins (rs12625547). MyGeneLog™. https://www.mygenelog.com/variants/rs12625547

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