Sensitive

Schizophrenia

TCF4 · rs1261117

Where this position leads

Condition: Schizophrenia

rs1261117 Condition: Schizophrenia Schizophrenia Condition rs1261117 rs1261117 TCF4

What the study found

Who was studied 11,185 European ancestry cases, 10,768 European ancestry controls; replicated in 1,262 African American ancestry individuals, 2,740 European ancestry individuals, 2,296 Asian ancestry individuals.

The effect Each copy of the T allele carried 1.60 times the odds of Schizophrenia; p = 3 × 10−10.

How common The T allele had a frequency of about 6% in the people studied.

Where it sits Chromosome 18, band 18q21.2 — in an intron of TCF4.

What each result means

C/C No copy of the version the research linked to Schizophrenia. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Schizophrenia. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Schizophrenia. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs1261117

What is rs1261117?

rs1261117 is a single position in the genome, in or near the TCF4 gene. Published research associates it with schizophrenia. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs1261117 linked to?

On MyGeneLog this position is linked to Schizophrenia. The research behind each link, and its sources, are set out on that condition page.

Does having rs1261117 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs1261117 come from?

GWAS Catalog, JAMA Psychiatry 2013, PMID:23894747. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Schizophrenia (rs1261117). MyGeneLog™. https://www.mygenelog.com/variants/rs1261117

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