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Weight

near SNRPEP3 · rs12596903

Where this position leads

Condition: Obesity and Body Weight

rs12596903 Condition: Obesity and Body Weight Obesity and Body Weight Condition rs12596903 rs12596903 near SNRPEP3

What the study found

Who was studied 165,419 East Asian ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0243 lower (95% confidence interval 0.017-0.031); p = 7 × 10−12.

How common The C allele had a frequency of about 18% in the people studied.

Where it sits Chromosome 16, band 16p12.3 — between genes, 4.3 kb from SNRPEP3.

What each result means

C/C Two copies of the version the research linked to Weight. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Weight. That is a smaller link than two copies.
T/T No copy of the version the research linked to Weight. This is the starting point the study compared everyone against.
Source
A cross-population atlas of genetic associations for 220 human phenotypes
Sakaue S, Kanai M, Tanigawa Y, Karjalainen J, Kurki M, Koshiba S, Narita A, Konuma T, Yamamoto K, Akiyama M, Ishigaki K, Suzuki A
and 34 more — show all
Suzuki K, Obara W, Yamaji K, Takahashi K, Asai S, Takahashi Y, Suzuki T, Shinozaki N, Yamaguchi H, Minami S, Murayama S, Yoshimori K, Nagayama S, Obata D, Higashiyama M, Masumoto A, Koretsune Y, Ito K, Terao C, Yamauchi T, Komuro I, Kadowaki T, Tamiya G, Yamamoto M, Nakamura Y, Kubo M, Murakami Y, Yamamoto K, Kamatani Y, Palotie A, Rivas MA, Daly MJ, Matsuda K, Okada Y
FinnGen
Nature genetics · 2021 · PMID 34594039

Questions about rs12596903

What is rs12596903?

rs12596903 is a single position in the genome, in or near the near SNRPEP3 gene. Published research associates it with weight. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12596903 linked to?

On MyGeneLog this position is linked to Obesity and Body Weight. The research behind each link, and its sources, are set out on that condition page.

Does having rs12596903 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12596903 come from?

GWAS Catalog, Nature genetics 2021, PMID:34594039. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Weight (rs12596903). MyGeneLog™. https://www.mygenelog.com/variants/rs12596903

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