Gene Knowledge Graph
UTC
Standard

Arrhythmia

near LINC01438 · rs12506083

Where this position leads

Condition: Arrhythmia

rs12506083 Condition: Arrhythmia Arrhythmia Condition rs12506083 rs12506083 near LINC014…

What the study found

Who was studied 17,861 Japanese ancestry cases, 194,592 Japanese ancestry controls.

The effect Each copy of the C allele carried 1.24 times the odds of Arrhythmia (95% confidence interval 1.19603958174599-1.27682763831639); p = 6 × 10−37.

Where it sits Chromosome 4, band 4q25 — between genes, 11.9 kb from LINC01438.

What each result means

A/A No copy of the version the research linked to Arrhythmia. This is the starting point the study compared everyone against.
A/C One copy of the version the research linked to Arrhythmia. That is a smaller link than two copies.
C/C Two copies of the version the research linked to Arrhythmia. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source
Large-scale genome-wide association study in a Japanese population identifies novel susceptibility loci across different diseases
Ishigaki K, Akiyama M, Kanai M, Takahashi A, Kawakami E, Sugishita H, Sakaue S, Matoba N, Low SK, Okada Y, Terao C, Amariuta T
and 77 more — show all
Gazal S, Kochi Y, Horikoshi M, Suzuki K, Ito K, Koyama S, Ozaki K, Niida S, Sakata Y, Sakata Y, Kohno T, Shiraishi K, Momozawa Y, Hirata M, Matsuda K, Ikeda M, Iwata N, Ikegawa S, Kou I, Tanaka T, Nakagawa H, Suzuki A, Hirota T, Tamari M, Chayama K, Miki D, Mori M, Nagayama S, Daigo Y, Miki Y, Katagiri T, Ogawa O, Obara W, Ito H, Yoshida T, Imoto I, Takahashi T, Tanikawa C, Suzuki T, Sinozaki N, Minami S, Yamaguchi H, Asai S, Takahashi Y, Yamaji K, Takahashi K, Fujioka T, Takata R, Yanai H, Masumoto A, Koretsune Y, Kutsumi H, Higashiyama M, Murayama S, Minegishi N, Suzuki K, Tanno K, Shimizu A, Yamaji T, Iwasaki M, Sawada N, Uemura H, Tanaka K, Naito M, Sasaki M, Wakai K, Tsugane S, Yamamoto M, Yamamoto K, Murakami Y, Nakamura Y, Raychaudhuri S, Inazawa J, Yamauchi T, Kadowaki T, Kubo M, Kamatani Y
Nature genetics · 2020 · PMID 32514122

Questions about rs12506083

What is rs12506083?

rs12506083 is a single position in the genome, in or near the near LINC01438 gene. Published research associates it with arrhythmia. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12506083 linked to?

On MyGeneLog this position is linked to Arrhythmia. The research behind each link, and its sources, are set out on that condition page.

Does having rs12506083 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12506083 come from?

GWAS Catalog, Nature genetics 2020, PMID:32514122. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Arrhythmia (rs12506083). MyGeneLog™. https://www.mygenelog.com/variants/rs12506083

← See all variants