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Eosinophil count

PPARG · rs12496413

Where this position leads

Condition: Blood Cell Counts

rs12496413 Condition: Blood Cell Counts Blood Cell Counts Condition rs12496413 rs12496413 PPARG

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−21, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 234,763 European ancestry individuals; replicated in 100,553 European ancestry individuals.

The effect The reported allele is C; the catalogue records no effect size ; p = 2 × 10−21.

How common The C allele had a frequency of about 67% in the people studied.

Where it sits Chromosome 3, band 3p25.2 — in an intron of PPARG.

What each result means

C/C Two copies of the version the research linked to Eosinophil count. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Eosinophil count. That is a smaller link than two copies.
T/T No copy of the version the research linked to Eosinophil count. This is the starting point the study compared everyone against.
Source

Questions about rs12496413

What is rs12496413?

rs12496413 is a single position in the genome, in or near the PPARG gene. Published research associates it with eosinophil count. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12496413 linked to?

On MyGeneLog this position is linked to Blood Cell Counts. The research behind each link, and its sources, are set out on that condition page.

Does having rs12496413 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12496413 come from?

GWAS Catalog, American journal of human genetics 2021, PMID:34469753. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Eosinophil count (rs12496413). MyGeneLog™. https://www.mygenelog.com/variants/rs12496413

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