Standard

C1S protein levels

near ATP6V1G1P1 · rs12433460

Where this position leads

Condition: Celiac Disease

rs12433460 Condition: Celiac Disease Celiac Disease Condition rs12433460 rs12433460 near ATP6V1G…

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.171 lower (95% confidence interval 0.16-0.19); p = 5 × 10−125.

How common The A allele had a frequency of about 27% in the people studied.

Where it sits Chromosome 14, band 14q32.33 — between genes, 10.5 kb from ATP6V1G1P1.

What each result means

A/A Two copies of the version the research linked to C1S protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to C1S protein levels. That is a smaller link than two copies.
C/C No copy of the version the research linked to C1S protein levels. This is the starting point the study compared everyone against.
Source

Questions about rs12433460

What is rs12433460?

rs12433460 is a single position in the genome, in or near the near ATP6V1G1P1 gene. Published research associates it with c1s protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12433460 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs12433460 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12433460 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

C1S protein levels (rs12433460). MyGeneLog™. https://www.mygenelog.com/variants/rs12433460

← See all variants