Sensitive

Squamous cell carcinoma

SLC17A8 · rs12296850

Where this position leads

Condition: Lung Squamous Cell Carcinoma

rs12296850 Condition: Lung Squamous Cell Carcinoma Lung Squamous Cell Carcinoma Condition rs12296850 rs12296850 SLC17A8

What the study found

Who was studied 833 Han Chinese ancestry cases, 3,094 Han Chinese ancestry controls; replicated in 2,223 Han Chinese ancestry cases, 6,409 Han Chinese ancestry controls.

The effect Each copy of the A allele carried 1.28 times the odds of Squamous cell carcinoma (95% confidence interval 1.19-1.39); p = 1 × 10−10.

How common The A allele had a frequency of about 74% in the people studied.

Where it sits Chromosome 12, band 12q23.1 — between genes, 4.3 kb from SLC17A8.

What each result means

A/A Two copies of the version the research linked to Squamous cell carcinoma. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Squamous cell carcinoma. That is a smaller link than two copies.
G/G No copy of the version the research linked to Squamous cell carcinoma. This is the starting point the study compared everyone against.
Source

Questions about rs12296850

What is rs12296850?

rs12296850 is a single position in the genome, in or near the SLC17A8 gene. Published research associates it with squamous cell carcinoma. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12296850 linked to?

On MyGeneLog this position is linked to Lung Squamous Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs12296850 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12296850 come from?

GWAS Catalog, PLoS Genet 2013, PMID:23341777. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Squamous cell carcinoma (rs12296850). MyGeneLog™. https://www.mygenelog.com/variants/rs12296850

← See all variants