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Free cholesterol levels in very large HDL

CARMIL1 · rs12196438

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−8, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 115,082 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0289 higher (95% confidence interval 0.019-0.039); p = 2 × 10−8.

How common The C allele had a frequency of about 83% in the people studied.

Where it sits Chromosome 6, band 6p22.2 — in an intron of CARMIL1.

What each result means

C/C Two copies of the version the research linked to Free cholesterol levels in very large HDL. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Free cholesterol levels in very large HDL. That is a smaller link than two copies.
T/T No copy of the version the research linked to Free cholesterol levels in very large HDL. This is the starting point the study compared everyone against.
Source

Questions about rs12196438

What is rs12196438?

rs12196438 is a single position in the genome, in or near the CARMIL1 gene. Published research associates it with free cholesterol levels in very large hdl. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs12196438 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12196438 come from?

GWAS Catalog, PLoS biology 2022, PMID:35213538. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Free cholesterol levels in very large HDL (rs12196438). MyGeneLog™. https://www.mygenelog.com/variants/rs12196438

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