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Psoriasis

HLA-C · rs12191877

Where this position leads

Condition: Psoriasis

rs12191877 Condition: Psoriasis Psoriasis Condition rs12191877 rs12191877 HLA-C

What the study found

Who was studied 1,359 European ancestry cases, 1,400 European ancestry controls; replicated in 5,048 European ancestry cases, 5,041 European ancestry controls.

The effect Each copy of the T allele carried 2.64 times the odds of Psoriasis; p = 1 × 10−100.

How common The T allele had a frequency of about 15% in the people studied.

Where it sits Chromosome 6, band 6p21.33 — between genes, 2.4 kb from WASF5P.

What each result means

C/C No copy of the version the research linked to Psoriasis. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Psoriasis. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Psoriasis. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs12191877

What is rs12191877?

rs12191877 is a single position in the genome, in or near the HLA-C gene. Published research associates it with psoriasis. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12191877 linked to?

On MyGeneLog this position is linked to Psoriasis. The research behind each link, and its sources, are set out on that condition page.

Does having rs12191877 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12191877 come from?

GWAS Catalog, Nat Genet 2009, PMID:19169254. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Psoriasis (rs12191877). MyGeneLog™. https://www.mygenelog.com/variants/rs12191877

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