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Relative abundance of the human milk microbiota (HMM) Lachnoanaerobaculum sp.

ZBTB8A · rs12117721

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−7, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 733 European ancestry, South Asian ancestry, East Asian ancestry, African American or Afro-Caribbean, Other admixed ancestry ancestry, Other ancestry females.

The effect Each copy of the G allele shifted the measure 0.632 higher (95% confidence interval 0.41-0.86); p = 5 × 10−8.

Where it sits Chromosome 1, band 1p35.1 — in an intron of ZBTB8A.

How common each version is

AG
Korean KRGDB
A 89.7% · G 10.3%
Korean Korea4K
A 90.3% · G 9.7%
Korean Korea1K
A 90.2% · G 9.8%
Japanese ToMMo
A 90.6% · G 9.4%
Vietnamese
A 93.1% · G 6.9%
World gnomAD
A 86.4% · G 13.6%
World 1000 Genomes
A 88.2% · G 11.8%
World TOPMed
A 86.1% · G 13.9%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A No copy of the version the research linked to Relative abundance of the human milk microbiota (HMM) Lachnoanaerobaculum sp.. This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Relative abundance of the human milk microbiota (HMM) Lachnoanaerobaculum sp.. That is a smaller link than two copies.
G/G Two copies of the version the research linked to Relative abundance of the human milk microbiota (HMM) Lachnoanaerobaculum sp.. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs12117721

What is rs12117721?

rs12117721 is a single position in the genome, in or near the ZBTB8A gene. Published research associates it with relative abundance of the human milk microbiota (hmm) lachnoanaerobaculum sp.. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs12117721 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12117721 come from?

GWAS Catalog, Cell host & microbe 2024, PMID:39293435. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Relative abundance of the human milk microbiota (HMM) Lachnoanaerobaculum sp. (rs12117721). MyGeneLog™. https://www.mygenelog.com/variants/rs12117721

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