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Cholesterol to total lipids ratio in large VLDL

MSRA · rs11777976

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 2 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 115,071 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0311 higher (95% confidence interval 0.023-0.039); p = 1 × 10−14.

How common The A allele had a frequency of about 50% in the people studied.

Where it sits Chromosome 8, band 8p23.1 — in an intron of MSRA.

How common each version is

AG
Korean KRGDB
A 93.6% · G 6.4%
Korean Korea4K
A 93.8% · G 6.2%
Japanese ToMMo
A 92.1% · G 7.9%
Vietnamese
A 97.2% · G 2.8%
World gnomAD
A 61.9% · G 38.1%
World 1000 Genomes
A 71.0% · G 29.0%
World TOPMed
A 63.5% · G 36.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Cholesterol to total lipids ratio in large VLDL. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Cholesterol to total lipids ratio in large VLDL. That is a smaller link than two copies.
G/G No copy of the version the research linked to Cholesterol to total lipids ratio in large VLDL. This is the starting point the study compared everyone against.
Source

Questions about rs11777976

What is rs11777976?

rs11777976 is a single position in the genome, in or near the MSRA gene. Published research associates it with cholesterol to total lipids ratio in large vldl. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs11777976 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs11777976 come from?

GWAS Catalog, PLoS biology 2022, PMID:35213538. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Cholesterol to total lipids ratio in large VLDL (rs11777976). MyGeneLog™. https://www.mygenelog.com/variants/rs11777976

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