Sensitive

Basal cell carcinoma

DEF8 · rs117204628

Where this position leads

Condition: Basal Cell Carcinoma

rs117204628 Condition: Basal Cell Carcinoma Basal Cell Carcinoma Condition rs117204628 rs117204628 DEF8

What the study found

Who was studied 17,416 European ancestry cases, 375,455 European ancestry controls.

The effect Each copy of the T allele shifted the measure 0.161 higher (95% confidence interval 0.11-0.22); p = 1 × 10−8.

How common The T allele had a frequency of about 3% in the people studied.

Where it sits Chromosome 16, band 16q24.3 — in the 3′ untranslated region of DEF8.

What each result means

C/C No copy of the version the research linked to Basal cell carcinoma. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Basal cell carcinoma. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Basal cell carcinoma. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs117204628

What is rs117204628?

rs117204628 is a single position in the genome, in or near the DEF8 gene. Published research associates it with basal cell carcinoma. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs117204628 linked to?

On MyGeneLog this position is linked to Basal Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs117204628 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs117204628 come from?

GWAS Catalog, Genome Med 2021, PMID:33549134. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Basal cell carcinoma (rs117204628). MyGeneLog™. https://www.mygenelog.com/variants/rs117204628

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