Sensitive

Basal cell carcinoma

FOXP1 · rs11708920

Where this position leads

Condition: Basal Cell Carcinoma

rs11708920 Condition: Basal Cell Carcinoma Basal Cell Carcinoma Condition rs11708920 rs11708920 FOXP1

What the study found

Who was studied 17,416 European ancestry cases, 375,455 European ancestry controls.

The effect Each copy of the T allele shifted the measure 0.122 higher (95% confidence interval 0.1-0.14); p = 3 × 10−29.

How common The T allele had a frequency of about 48% in the people studied.

Where it sits Chromosome 3, band 3p13 — in an intron of FOXP1.

What each result means

G/G No copy of the version the research linked to Basal cell carcinoma. This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Basal cell carcinoma. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Basal cell carcinoma. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs11708920

What is rs11708920?

rs11708920 is a single position in the genome, in or near the FOXP1 gene. Published research associates it with basal cell carcinoma. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs11708920 linked to?

On MyGeneLog this position is linked to Basal Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs11708920 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs11708920 come from?

GWAS Catalog, Genome Med 2021, PMID:33549134. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Basal cell carcinoma (rs11708920). MyGeneLog™. https://www.mygenelog.com/variants/rs11708920

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