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Standard

Gamma glutamyltransferase levels (UKB data field 30730)

CABIN1 · rs116954205

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 394,642 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.07 higher (95% confidence interval 0.051-0.089); p = 3 × 10−14.

How common The T allele had a frequency of about 1% in the people studied.

Where it sits Chromosome 22, band 22q11.23 — in an intron of CABIN1.

How common each version is

CT
World gnomAD
C 99.3% · T 0.7%
World 1000 Genomes
C 99.5% · T 0.5%
World TOPMed
C 99.3% · T 0.7%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. No Korean figure for this position yet.

What each result means

C/C No copy of the version the research linked to Gamma glutamyltransferase levels (UKB data field 30730). This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Gamma glutamyltransferase levels (UKB data field 30730). That is a smaller link than two copies.
T/T Two copies of the version the research linked to Gamma glutamyltransferase levels (UKB data field 30730). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

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Gamma glutamyltransferase levels (UKB data field 30730) (rs116954205). MyGeneLog™. https://www.mygenelog.com/variants/rs116954205

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