Standard

Serum alkaline phosphatase levels

TNKS2 · rs10881988

What the study found

Who was studied 390,964 European ancestry individuals; replicated in 105,030 East Asian ancestry individuals.

The effect Each copy of the A allele shifted the measure 6.54 z-score higher; p = 6 × 10−11.

How common The A allele had a frequency of about 49% in the people studied.

Where it sits Chromosome 10, band 10q23.32 — between genes, 18.7 kb from TNKS2.

What each result means

A/A Two copies of the version the research linked to Serum alkaline phosphatase levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Serum alkaline phosphatase levels. That is a smaller link than two copies.
G/G No copy of the version the research linked to Serum alkaline phosphatase levels. This is the starting point the study compared everyone against.
Source

Questions about rs10881988

What is rs10881988?

rs10881988 is a single position in the genome, in or near the TNKS2 gene. Published research associates it with serum alkaline phosphatase levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs10881988 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs10881988 come from?

GWAS Catalog, Nature communications 2021, PMID:33547301. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Serum alkaline phosphatase levels (rs10881988). MyGeneLog™. https://www.mygenelog.com/variants/rs10881988

← See all variants