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Standard

Monocyte count

near SPIC · rs10860738

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−10, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 521,594 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0128 SD unit higher (95% confidence interval 0.0089-0.0167); p = 1 × 10−10.

How common The A allele had a frequency of about 67% in the people studied.

Where it sits Chromosome 12, band 12q23.2 — between genes, 1.1 kb from SPIC.

How common each version is

AG
Korean KRGDB
A 36.9% · G 63.1%
Korean Korea4K
A 37.3% · G 62.7%
Korean Korea1K
A 39.5% · G 60.5%
Japanese ToMMo
A 38.1% · G 61.9%
Vietnamese
A 45.8% · G 54.2%
World gnomAD
A 67.5% · G 32.5%
World 1000 Genomes
A 62.0% · G 38.0%
World TOPMed
A 67.0% · G 33.0%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Monocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Monocyte count. That is a smaller link than two copies.
G/G No copy of the version the research linked to Monocyte count. This is the starting point the study compared everyone against.
Source

Quoting this page

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Monocyte count (rs10860738). MyGeneLog™. https://www.mygenelog.com/variants/rs10860738

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