Sensitive

Esophageal cancer

PDE4D · rs10052657

Where this position leads

Condition: Oesophageal Cancer

rs10052657 Condition: Oesophageal Cancer Oesophageal Cancer Condition rs10052657 rs10052657 PDE4D

What the study found

Who was studied 2,031 Han Chinese ancestry cases, 2,044 Han Chinese ancestry controls; replicated in 3,986 Han Chinese ancestry cases, 4,157 Han Chinese ancestry controls.

The effect Each copy of the C allele carried 1.49 times the odds of Esophageal cancer (95% confidence interval 1.37-1.61); p = 2 × 10−19.

How common The C allele had a frequency of about 78% in the people studied.

Where it sits Chromosome 5, band 5q11.2 — in an intron of PDE4D.

What each result means

A/A No copy of the version the research linked to Esophageal cancer. This is the starting point the study compared everyone against.
A/C One copy of the version the research linked to Esophageal cancer. That is a smaller link than two copies.
C/C Two copies of the version the research linked to Esophageal cancer. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs10052657

What is rs10052657?

rs10052657 is a single position in the genome, in or near the PDE4D gene. Published research associates it with esophageal cancer. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs10052657 linked to?

On MyGeneLog this position is linked to Oesophageal Cancer. The research behind each link, and its sources, are set out on that condition page.

Does having rs10052657 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs10052657 come from?

GWAS Catalog, Nature genetics 2011, PMID:21642993. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Esophageal cancer (rs10052657). MyGeneLog™. https://www.mygenelog.com/variants/rs10052657

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