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SPARC-like protein 1 levels

SCPPPQ1 · rs10013990

What the study found

Who was studied 2,935 Qatari ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.206 lower (95% confidence interval 0.15-0.26); p = 3 × 10−12.

How common The T allele had a frequency of about 30% in the people studied.

Where it sits Chromosome 4, band 4q22.1 — in an intron of SCPPPQ1.

What each result means

C/C No copy of the version the research linked to SPARC-like protein 1 levels. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to SPARC-like protein 1 levels. That is a smaller link than two copies.
T/T Two copies of the version the research linked to SPARC-like protein 1 levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs10013990

What is rs10013990?

rs10013990 is a single position in the genome, in or near the SCPPPQ1 gene. Published research associates it with sparc-like protein 1 levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs10013990 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs10013990 come from?

GWAS Catalog, Human molecular genetics 2023, PMID:36168886. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

SPARC-like protein 1 levels (rs10013990). MyGeneLog™. https://www.mygenelog.com/variants/rs10013990

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