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Standard

Monocyte count

near LINC00399 · rs9521344

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−27, with 2 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 349,856 European ancestry individuals, 95,119 East Asian ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.0232 lower (95% confidence interval 0.019-0.027); p = 9 × 10−28.

Where it sits Chromosome 13, band 13q33.3 — between genes, 16.1 kb from LINC00399.

How common each version is

CT
Korean KRGDB
C 56.9% · T 43.1%
Korean Korea4K
C 58.9% · T 41.1%
Korean Korea1K
C 57.8% · T 42.2%
Japanese ToMMo
C 55.5% · T 44.5%
Vietnamese
C 42.0% · T 58.0%
World gnomAD
C 68.1% · T 31.9%
World 1000 Genomes
C 65.0% · T 35.0%
World TOPMed
C 67.9% · T 32.1%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

C/C No copy of the version the research linked to Monocyte count. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Monocyte count. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Monocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Monocyte count (rs9521344). MyGeneLog™. https://www.mygenelog.com/variants/rs9521344

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