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Standard

Hypothyroidism

POLR1HASP · rs9260323

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−19, with 2 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 394,626 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.111 lower (95% confidence interval 0.085-0.137); p = 2 × 10−19.

How common The A allele had a frequency of about 18% in the people studied.

Where it sits Chromosome 6, band 6p22.1 — in the 3′ untranslated region of POLR1HASP.

How common each version is

AG
Korean KRGDB
A 49.8% · G 50.2%
Korean Korea4K
A 50.6% · G 49.4%
Japanese ToMMo
A 63.9% · G 36.1%
World gnomAD
A 27.8% · G 72.2%
World 1000 Genomes
A 32.2% · G 67.8%

By ancestry gnomAD

East Asian
A 37.6% · G 62.4%
European (non-Finnish)
A 21.9% · G 78.1%
African / African American
A 34.3% · G 65.7%
South Asian
A 37.1% · G 62.8%
Admixed American (Latino)
A 34.9% · G 65.1%
Middle Eastern
A 33.3% · G 66.7%
Finnish
A 18.1% · G 81.9%
Ashkenazi Jewish
A 39.5% · G 60.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

A/A Two copies of the version the research linked to Hypothyroidism. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Hypothyroidism. That is a smaller link than two copies.
G/G No copy of the version the research linked to Hypothyroidism. This is the starting point the study compared everyone against.
Source

Quoting this page

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Hypothyroidism (rs9260323). MyGeneLog™. https://www.mygenelog.com/variants/rs9260323

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