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Standard

Goiter

ITPK1 · rs8013274

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−10, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 2,711 European ancestry cases, 456,942 European ancestry controls, 1,127 East Asian ancestry cases, 172,656 East Asian ancestry controls.

The effect Each copy of the T allele shifted the measure 0.207 lower (95% confidence interval 0.14-0.27); p = 1 × 10−10.

Where it sits Chromosome 14, band 14q32.12 — in an intron of ITPK1.

How common each version is

GT
Korean KRGDB
G 87.5% · T 12.5%
Korean Korea4K
G 89.2% · T 10.8%
Japanese ToMMo
G 89.1% · T 10.9%
World 1000 Genomes
G 73.1% · T 26.9%
World TOPMed
G 73.5% · T 26.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

G/G No copy of the version the research linked to Goiter. This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Goiter. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Goiter. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Goiter (rs8013274). MyGeneLog™. https://www.mygenelog.com/variants/rs8013274

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