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Stands on its own.
Nothing else here links to this position yet — but the page above is the point: what the
research found, what each genotype means, and where it came from, in language you can
read. Links to conditions, drugs and the senses appear automatically if we write them.
Strength of the evidence
1 / 4
Its strongest genetic-study result is p = 10−8, with 1 associations in the GWAS Catalog.
How this is scored
4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.
What the study found
Who was studied 1,395 European ancestry cases, 5,366 European ancestry controls.
The effect
Each copy of the T allele carried 4.71 times the odds of Vesicoureteral reflux (95% confidence interval 2.71594511101909-8.17156136369311); p = 3 × 10−8.
How common The T allele had a frequency of about 16% in the people studied.
Where it sits Chromosome 8, band 8p21.3 — in an intron of CSGALNACT1.
How common each version is
CT
Japanese ToMMo
C 100.0%
World gnomAD
C 88.3% · T 11.7%
World 1000 Genomes
C 91.7% · T 8.3%
World TOPMed
C 89.0% · T 11.0%
The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. No Korean figure for this position yet.
What each result means
C/CNo copy of the version the research linked to Vesicoureteral reflux. This is the starting point the study compared everyone against.
C/TOne copy of the version the research linked to Vesicoureteral reflux. That is a smaller link than two copies.
T/TTwo copies of the version the research linked to Vesicoureteral reflux. That is the strongest link of the three results. A link in a study is not a diagnosis.
Journal of the American Society of Nephrology : JASN · 2021 · PMID 33597122
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