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Standard

Triglycerides in VLDL

PPARG · rs71304101

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−18, with 18 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the A allele shifted the measure 0.03 mmol/L lower (95% confidence interval 0.03-0.03); p = 3 × 10−17.

Where it sits Chromosome 3, band 3p25.2 — in an intron of PPARG.

How common each version is

AG
Korean KRGDB
A 5.1% · G 94.9%
Korean Korea4K
A 4.7% · G 95.3%
Japanese ToMMo
A 2.9% · G 97.1%
Vietnamese
A 2.3% · G 97.7%
World gnomAD
A 9.2% · G 90.8%
World 1000 Genomes
A 7.2% · G 92.8%
World TOPMed
A 8.3% · G 91.7%

By ancestry gnomAD

East Asian
A 4.1% · G 95.9%
European (non-Finnish)
A 12.6% · G 87.4%
African / African American
A 3.0% · G 97.0%
South Asian
A 12.3% · G 87.7%
Admixed American (Latino)
A 8.5% · G 91.5%
Middle Eastern
A 5.4% · G 94.6%
Finnish
A 15.6% · G 84.4%
Ashkenazi Jewish
A 5.8% · G 94.2%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

A/A Two copies of the version the research linked to Triglycerides in VLDL. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Triglycerides in VLDL. That is a smaller link than two copies.
G/G No copy of the version the research linked to Triglycerides in VLDL. This is the starting point the study compared everyone against.
Source

Quoting this page

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Triglycerides in VLDL (rs71304101). MyGeneLog™. https://www.mygenelog.com/variants/rs71304101

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