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Standard

VWC2L protein levels

VWC2L · rs4673828

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−37, with 2 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.087 higher (95% confidence interval 0.073-0.101); p = 7 × 10−38.

How common The T allele had a frequency of about 24% in the people studied.

Where it sits Chromosome 2, band 2q34 — in an intron of VWC2L.

How common each version is

CT
Korean KRGDB
C 76.0% · T 24.0%
Korean Korea4K
C 75.7% · T 24.3%
Korean Korea1K
C 74.6% · T 25.4%
Japanese ToMMo
C 70.4% · T 29.6%
Vietnamese
C 84.1% · T 15.9%
World gnomAD
C 79.0% · T 21.1%
World 1000 Genomes
C 80.9% · T 19.1%
World TOPMed
C 79.8% · T 20.2%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

C/C No copy of the version the research linked to VWC2L protein levels. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to VWC2L protein levels. That is a smaller link than two copies.
T/T Two copies of the version the research linked to VWC2L protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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VWC2L protein levels (rs4673828). MyGeneLog™. https://www.mygenelog.com/variants/rs4673828

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