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Standard

Lymphocyte count

ADGRL4 · rs2275902

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 7 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 524,923 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0161 SD unit lower (95% confidence interval 0.012-0.02); p = 5 × 10−15.

How common The C allele had a frequency of about 30% in the people studied.

Where it sits Chromosome 1, band 1p31.1 — a missense change in ADGRL4.

How common each version is

CG
Korean KRGDB
C 22.2% · G 77.8%
Korean Korea4K
C 20.3% · G 79.7%
Korean Korea1K
C 21.2% · G 78.8%
Japanese ToMMo
C 24.4% · G 75.6%
Vietnamese
C 19.7% · G 80.3%
World gnomAD
C 27.9% · G 72.1%
World 1000 Genomes
C 25.3% · G 74.7%
World TOPMed
C 27.7% · G 72.4%

By ancestry gnomAD

East Asian
C 23.6% · G 76.4%
European (non-Finnish)
C 29.3% · G 70.7%
African / African American
C 27.4% · G 72.7%
South Asian
C 22.0% · G 78.0%
Admixed American (Latino)
C 25.6% · G 74.4%
Middle Eastern
C 29.1% · G 70.9%
Finnish
C 27.3% · G 72.7%
Ashkenazi Jewish
C 33.3% · G 66.7%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

C/C Two copies of the version the research linked to Lymphocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/G One copy of the version the research linked to Lymphocyte count. That is a smaller link than two copies.
G/G No copy of the version the research linked to Lymphocyte count. This is the starting point the study compared everyone against.
Source

Quoting this page

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Lymphocyte count (rs2275902). MyGeneLog™. https://www.mygenelog.com/variants/rs2275902

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