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Standard

High-density lipoprotein levels (MTAG)

near LPL · rs185033560

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−7, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 361,194 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.058 higher (95% confidence interval 0.037-0.079); p = 5 × 10−8.

Where it sits Chromosome 8, band 8p21.3 — between genes, 60.5 kb from LPL.

How common each version is

GT
Japanese ToMMo
G 0.0% · T 100.0%
World gnomAD
G 0.9% · T 99.1%
World 1000 Genomes
G 0.6% · T 99.4%
World TOPMed
G 1.0% · T 99.0%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. No Korean figure for this position yet.

What each result means

G/G No copy of the version the research linked to High-density lipoprotein levels (MTAG). This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to High-density lipoprotein levels (MTAG). That is a smaller link than two copies.
T/T Two copies of the version the research linked to High-density lipoprotein levels (MTAG). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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High-density lipoprotein levels (MTAG) (rs185033560). MyGeneLog™. https://www.mygenelog.com/variants/rs185033560

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