Links from this page to related variants, conditions, drugs and topics are not included for automated readers. Those connections are the Gene Knowledge Graph and are licensed as data: https://www.mygenelog.com/license

Standard

Monocyte count

TSPO · rs138918

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−42, with 4 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 408,112 British individuals.

The effect Each copy of the A allele shifted the measure 0.0312 higher (95% confidence interval 0.027-0.036); p = 6 × 10−43.

How common The A allele had a frequency of about 39% in the people studied.

Where it sits Chromosome 22, band 22q13.2 — between genes, 0.2 kb from TSPO.

How common each version is

AG
Korean KRGDB
A 0.2% · G 99.8%
Korean Korea4K
A 0.1% · G 99.9%
Japanese ToMMo
A 0.0% · G 100.0%
Vietnamese
A 1.9% · G 98.1%
World gnomAD
A 29.3% · G 70.7%
World 1000 Genomes
A 18.3% · G 81.7%
World TOPMed
A 28.7% · G 71.3%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Monocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Monocyte count. That is a smaller link than two copies.
G/G No copy of the version the research linked to Monocyte count. This is the starting point the study compared everyone against.
Source

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Monocyte count (rs138918). MyGeneLog™. https://www.mygenelog.com/variants/rs138918

← See all variants