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Standard

Phosphatidylethanolamines (16:0/18:2) (Model 1)

ALDH1A2 · rs1373655

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−58, with 12 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 7,279 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.129 lower; p = 2 × 10−12.

Where it sits Chromosome 15, band 15q21.3 — inside ALDH1A2.

How common each version is

GT
Korean KRGDB
G 70.0% · T 30.0%
Korean Korea4K
G 71.0% · T 29.0%
Korean Korea1K
G 71.7% · T 28.3%
Japanese ToMMo
G 72.8% · T 27.2%
World gnomAD
G 77.5% · T 22.5%
World 1000 Genomes
G 79.9% · T 20.1%
World TOPMed
G 78.0% · T 22.0%

By ancestry gnomAD

East Asian
G 71.7% · T 28.3%
European (non-Finnish)
G 69.5% · T 30.5%
African / African American
G 91.2% · T 8.8%
South Asian
G 74.5% · T 25.5%
Admixed American (Latino)
G 79.0% · T 21.0%
Middle Eastern
G 72.5% · T 27.6%
Finnish
G 77.3% · T 22.7%
Ashkenazi Jewish
G 76.8% · T 23.2%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

G/G No copy of the version the research linked to Phosphatidylethanolamines (16:0/18:2) (Model 1). This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Phosphatidylethanolamines (16:0/18:2) (Model 1). That is a smaller link than two copies.
T/T Two copies of the version the research linked to Phosphatidylethanolamines (16:0/18:2) (Model 1). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Phosphatidylethanolamines (16:0/18:2) (Model 1) (rs1373655). MyGeneLog™. https://www.mygenelog.com/variants/rs1373655

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