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Standard

Phosphatidylethanolamine (36:3) levels

ALDH1A2 · rs11856239

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−7, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 650 Amish individuals; replicated in 847 European American ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.339 lower; p = 4 × 10−8.

How common The C allele had a frequency of about 36% in the people studied.

Where it sits Chromosome 15, band 15q21.3 — inside ALDH1A2.

How common each version is

CT
Korean KRGDB
C 16.0% · T 84.0%
Korean Korea4K
C 16.3% · T 83.7%
Japanese ToMMo
C 17.4% · T 82.6%
World gnomAD
C 24.1% · T 75.9%
World 1000 Genomes
C 18.9% · T 81.1%
World TOPMed
C 24.4% · T 75.6%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

C/C Two copies of the version the research linked to Phosphatidylethanolamine (36:3) levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Phosphatidylethanolamine (36:3) levels. That is a smaller link than two copies.
T/T No copy of the version the research linked to Phosphatidylethanolamine (36:3) levels. This is the starting point the study compared everyone against.
Source

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Phosphatidylethanolamine (36:3) levels (rs11856239). MyGeneLog™. https://www.mygenelog.com/variants/rs11856239

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