Autoimmune

Obstetric Antiphospholipid Syndrome

Reviewed September 10, 2026

Usually diagnosed and discussed purely as an antibody condition, not a genetic one. The first genome-wide study of it, in 115 Japanese patients, found a locus near C1D conferring substantially elevated risk — part of a picture the paper connects to why live births stay limited even with standard treatment.

What this condition connects to

Obstetric Antiphospholipid Syndrome Variant: rs79154414 rs79154414 Variant Obstetric Antiphospholipid Syndrome Obstetric Antiphospho… Syndrome Autoimmune
Prevalence
Sugiura-Ogasawara et al. 2017 ran the first genome-wide association study of obstetric antiphospholipid syndrome: 115 Japanese patients against 419 healthy controls across 426,344 SNPs, identifying two loci reaching significance — TSHR and a locus near C1D — both conferring substantially elevated risk (PMID:28424481).
Inheritance
A common variant from a first-of-its-kind, single-population study, shifting risk. Distinct from the antiphospholipid antibodies themselves, which are acquired autoimmune markers rather than inherited, and which remain the basis for clinical diagnosis.

Antiphospholipid syndrome (APS) is diagnosed by a combination of clinical events and laboratory findings: in its obstetric form, that means recurrent pregnancy loss or other defined pregnancy complications, together with a positive antiphospholipid antibody test confirmed on two separate occasions. It is usually discussed purely as an acquired autoimmune, antibody-driven condition — which is accurate, but it is also why its genetics have received comparatively little study; a condition framed entirely around an antibody test is not automatically treated as worth a genome-wide search.

The first study of its kind

Sugiura-Ogasawara et al. 2017 ran the first genome-wide association study of obstetric APS specifically: 115 Japanese patients against 419 healthy controls, testing 426,344 SNPs. They identified two loci reaching significance — one in TSHR (the thyroid-stimulating hormone receptor gene) and one near C1D, the gene this page's variant sits in. Both alleles are described as conferring substantially elevated risk.

The paper frames this as a potential piece of a larger, practically important question: why live birth rates remain limited in obstetric APS even with standard anticoagulant treatment (typically low-dose aspirin plus heparin). A genetic contributor that treatment doesn't address is one candidate explanation for that gap.

Clinical detail

What this does not change about diagnosis or treatment

Obstetric APS is diagnosed by antibody testing and clinical history, and treated with established protocols (typically low-dose aspirin and heparin) — this page's variant changes neither. It comes from one first-of-its-kind study in 115 patients, and is reported here as an early finding worth tracking, not a validated clinical marker.

A study this size, in one population, is a genuine first step rather than a settled result. The paper itself frames it that way — identifying two candidate loci is the start of a research direction, not a conclusion about mechanism or a tool ready for clinical use.

Related here

TSHR, the other locus this study found, connects to thyroid biology — a reminder that autoimmune conditions often cluster and share genetic architecture even when they present in completely different organ systems.

Related variants MyGeneLog™ checks for

What a 23andMe/AncestryDNA export or raw VCF can and can't tell you about Obstetric Antiphospholipid Syndrome comes down to these specific, well-studied positions — not a diagnosis.

Sensitive

Obstetric antiphospholipid syndrome

C1D · rs79154414

See detailed info →

Sources

Databases, guidelines and references

Papers, with their authors

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Obstetric Antiphospholipid Syndrome. MyGeneLog™. https://www.mygenelog.com/conditions/obstetric-antiphospholipid-syndrome

Questions about Obstetric Antiphospholipid Syndrome

Does this variant diagnose antiphospholipid syndrome?

No. APS is diagnosed by a positive antiphospholipid antibody test confirmed on two occasions, together with a defined clinical history. This variant is a genetic association from one early study and is not used diagnostically.

Should this change how obstetric APS is treated?

No. Standard treatment (typically low-dose aspirin and heparin) is unchanged by this finding. It comes from one first-of-its-kind study and is reported as an early research finding, not a validated clinical marker.

Why has APS genetics been studied so little compared to other conditions on this site?

It is usually framed entirely as an acquired, antibody-driven autoimmune condition, which is accurate but meant its genetics were not routinely searched. This 2017 study was the first genome-wide association study of the obstetric form specifically.

What is the connection to thyroid disease?

The same study found a second locus, in TSHR, the thyroid-stimulating hormone receptor gene — not on this page but worth knowing about. Autoimmune conditions often share genetic architecture across organ systems, and this is one example.

Free to reuse. This page's text is original writing from freely-available research, licensed CC BY 4.0 — reuse it, including commercially, with attribution to MyGeneLog™. It's general research-derived information, not medical advice or a diagnosis — see Terms of Use.